VIGR Webinar May 1, 2020. Updated May 11, 2020
Presentation Slides
10x_analysis_webinar.pdf
Popular Tools + Methods
Software List
Current best practices in single‐cell RNA‐seq analysis: a tutorial
Experimental design for single-cell RNA sequencing
Rotating the knee (plot) and related yoga
seurat
monocle
kallisto + bustools
immcantation
(immune cell profiling)
Harmony
MAGIC
+
PHATE
10X Genomics Resources
Cell Ranger:
Getting started with Cell Ranger- Dave Tang
Single-cell RNA sequencing (Cell Ranger) - UCONN
Tutorials from 10X
Feature Barcoding Analysis